Detailed information of SNP:
|
SNP ID:
sf0603937118(Gbrowse)
Chromosome: chr06 Position: 3937118 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1411 | 97.66% | 2.34% |
| All Indica | 796 | 99.50% | 0.50% |
| All Japonica | 492 | 94.72% | 5.28% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 374 | 99.47% | 0.53% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 210 | 99.05% | 0.95% |
| Temperate Japonica | 331 | 98.79% | 1.21% |
| Tropical Japonica | 94 | 85.11% | 14.89% |
| Japonica Intermediate | 67 | 88.06% | 11.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0603937118 | G->A | INTERGENIC | None |