Detailed information of SNP:



SNP ID: sf0604417263(Gbrowse)

Chromosome: chr06

Position: 4417263
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 72.97% 27.03%
All Indica797 74.28% 25.72%
All Japonica497 74.25% 25.75%
Aus67 74.63% 25.37%
Indica I374 93.32% 6.68%
Indica II212 52.83% 47.17%
Indica Intermediate211 62.09% 37.91%
Temperate Japonica335 96.12% 3.88%
Tropical Japonica94 9.57% 90.43%
Japonica Intermediate68 55.88% 44.12%
Group VI/Aromatic14 35.71% 64.29%
Intermediate42 42.86% 57.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0604417263 G->A INTERGENIC None