Detailed information of SNP:
|
SNP ID:
sf0604584934(Gbrowse)
Chromosome: chr06 Position: 4584934 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 54.66% | 45.34% |
| All Indica | 796 | 88.44% | 11.56% |
| All Japonica | 497 | 6.04% | 93.96% |
| Aus | 67 | 26.87% | 73.13% |
| Indica I | 375 | 95.47% | 4.53% |
| Indica II | 213 | 69.01% | 30.99% |
| Indica Intermediate | 208 | 95.67% | 4.33% |
| Temperate Japonica | 335 | 6.27% | 93.73% |
| Tropical Japonica | 94 | 5.32% | 94.68% |
| Japonica Intermediate | 68 | 5.88% | 94.12% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 50.00% | 50.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0604584934 | A->G | INTERGENIC | None |