Detailed information of SNP:
|
SNP ID:
sf0604726833(Gbrowse)
Chromosome: chr06 Position: 4726833 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1260 | 91.03% | 8.97% |
| All Indica | 642 | 82.87% | 17.13% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 274 | 67.88% | 32.12% |
| Indica II | 194 | 98.45% | 1.55% |
| Indica Intermediate | 174 | 89.08% | 10.92% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 95.00% | 5.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0604726833 | G->A | INTERGENIC | None |