Detailed information of SNP:
SNP ID:
sf0605698432(Gbrowse)
Chromosome: chr06 Position: 5698432 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1403 | 91.30% | 8.70% |
All Indica | 784 | 84.82% | 15.18% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 362 | 72.38% | 27.62% |
Indica II | 212 | 97.64% | 2.36% |
Indica Intermediate | 210 | 93.33% | 6.67% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 41 | 92.68% | 7.32% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0605698432 | G->A | INTERGENIC | None |