Detailed information of SNP:
|
SNP ID:
sf0605916768(Gbrowse)
Chromosome: chr06 Position: 5916768 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1313 | 95.28% | 4.72% |
| All Indica | 744 | 91.80% | 8.20% |
| All Japonica | 449 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 349 | 85.96% | 14.04% |
| Indica II | 206 | 98.54% | 1.46% |
| Indica Intermediate | 189 | 95.24% | 4.76% |
| Temperate Japonica | 297 | 100.00% | 0.00% |
| Tropical Japonica | 90 | 100.00% | 0.00% |
| Japonica Intermediate | 62 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 97.44% | 2.56% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0605916768 | G->A | INTERGENIC | None |