Detailed information of SNP:
SNP ID:
sf0606071383(Gbrowse)
Chromosome: chr06 Position: 6071383 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1412 | 98.44% | 1.56% |
All Indica | 792 | 97.22% | 2.78% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 372 | 97.58% | 2.42% |
Indica II | 210 | 96.67% | 3.33% |
Indica Intermediate | 210 | 97.14% | 2.86% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0606071383 | A->G | INTERGENIC | None |