Detailed information of SNP:
|
SNP ID:
sf0606076150(Gbrowse)
Chromosome: chr06 Position: 6076150 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1376 | 98.18% | 1.82% |
| All Indica | 759 | 96.97% | 3.03% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 67 | 97.01% | 2.99% |
| Indica I | 360 | 98.61% | 1.39% |
| Indica II | 194 | 95.88% | 4.12% |
| Indica Intermediate | 205 | 95.12% | 4.88% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0606076150 | G->A | INTERGENIC | None |