Detailed information of SNP:
|
SNP ID:
sf0606128620(Gbrowse)
Chromosome: chr06 Position: 6128620 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1365 | 95.02% | 4.98% |
| All Indica | 773 | 95.99% | 4.01% |
| All Japonica | 471 | 92.99% | 7.01% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 361 | 97.23% | 2.77% |
| Indica II | 211 | 95.73% | 4.27% |
| Indica Intermediate | 201 | 94.03% | 5.97% |
| Temperate Japonica | 319 | 90.60% | 9.40% |
| Tropical Japonica | 90 | 98.89% | 1.11% |
| Japonica Intermediate | 62 | 96.77% | 3.23% |
| Group VI/Aromatic | 13 | 76.92% | 23.08% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0606128620 | G->A | INTERGENIC | None |