Detailed information of SNP:



SNP ID: sf0606310326(Gbrowse)

Chromosome: chr06

Position: 6310326
Major allele: C

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1410 56.31% 43.69%
All Indica799 78.22% 21.78%
All Japonica489 13.09% 86.91%
Aus67 97.01% 2.99%
Indica I375 68.53% 31.47%
Indica II213 94.37% 5.63%
Indica Intermediate211 79.15% 20.85%
Temperate Japonica328 1.22% 98.78%
Tropical Japonica94 55.32% 44.68%
Japonica Intermediate67 11.94% 88.06%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 63.41% 36.59%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0606310326 A->C INTERGENIC None