Detailed information of SNP:
|
SNP ID:
sf0606956056(Gbrowse)
Chromosome: chr06 Position: 6956056 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1254 | 96.25% | 3.75% |
| All Indica | 646 | 94.74% | 5.26% |
| All Japonica | 490 | 97.55% | 2.45% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 306 | 93.46% | 6.54% |
| Indica II | 156 | 93.59% | 6.41% |
| Indica Intermediate | 184 | 97.83% | 2.17% |
| Temperate Japonica | 333 | 97.00% | 3.00% |
| Tropical Japonica | 90 | 98.89% | 1.11% |
| Japonica Intermediate | 67 | 98.51% | 1.49% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 37 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0606956056 | A->G | INTERGENIC | None |