Detailed information of SNP:
|
SNP ID:
sf0606973870(Gbrowse)
Chromosome: chr06 Position: 6973870 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 84.33% | 15.67% |
| All Indica | 797 | 82.43% | 17.57% |
| All Japonica | 497 | 98.39% | 1.61% |
| Aus | 67 | 4.48% | 95.52% |
| Indica I | 374 | 94.39% | 5.61% |
| Indica II | 212 | 63.21% | 36.79% |
| Indica Intermediate | 211 | 80.57% | 19.43% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 93.62% | 6.38% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 78.57% | 21.43% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0606973870 | G->A | INTERGENIC | None |