Detailed information of SNP:



SNP ID: sf0607007710(Gbrowse)

Chromosome: chr06

Position: 7007710
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 53.00% 47.00%
All Indica799 30.29% 69.71%
All Japonica497 98.59% 1.41%
Aus67 0.00% 100.00%
Indica I375 12.53% 87.47%
Indica II213 56.81% 43.19%
Indica Intermediate211 35.07% 64.93%
Temperate Japonica335 99.10% 0.90%
Tropical Japonica94 97.87% 2.13%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 47.62% 52.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0607007710 C->T INTERGENIC None