Detailed information of SNP:
|
SNP ID:
sf0607013878(Gbrowse)
Chromosome: chr06 Position: 7013878 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 79.68% | 20.32% |
| All Indica | 798 | 65.79% | 34.21% |
| All Japonica | 497 | 99.20% | 0.80% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 374 | 66.31% | 33.69% |
| Indica II | 213 | 59.15% | 40.85% |
| Indica Intermediate | 211 | 71.56% | 28.44% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 80.49% | 19.51% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0607013878 | G->A | INTERGENIC | None |