Detailed information of SNP:
|
SNP ID:
sf0607145467(Gbrowse)
Chromosome: chr06 Position: 7145467 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 84.49% | 15.51% |
| All Indica | 799 | 81.48% | 18.52% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 66 | 7.58% | 92.42% |
| Indica I | 375 | 67.73% | 32.27% |
| Indica II | 213 | 96.71% | 3.29% |
| Indica Intermediate | 211 | 90.52% | 9.48% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 80.95% | 19.05% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0607145467 | G->A | INTERGENIC | None |