Detailed information of SNP:
SNP ID:
sf0607245797(Gbrowse)
Chromosome: chr06 Position: 7245797 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1416 | 61.23% | 38.77% |
All Indica | 799 | 99.25% | 0.75% |
All Japonica | 496 | 1.41% | 98.59% |
Aus | 65 | 49.23% | 50.77% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 97.18% | 2.82% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 334 | 0.90% | 99.10% |
Tropical Japonica | 94 | 1.06% | 98.94% |
Japonica Intermediate | 68 | 4.41% | 95.59% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 50.00% | 50.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0607245797 | A->G | INTERGENIC | None |