Detailed information of SNP:



SNP ID: sf0607251723(Gbrowse)

Chromosome: chr06

Position: 7251723
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 95.84% 4.16%
All Indica799 94.74% 5.26%
All Japonica497 99.20% 0.80%
Aus67 100.00% 0.00%
Indica I375 97.60% 2.40%
Indica II213 96.24% 3.76%
Indica Intermediate211 88.15% 11.85%
Temperate Japonica335 99.40% 0.60%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 7.14% 92.86%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0607251723 G->A INTERGENIC None