Detailed information of SNP:
|
SNP ID:
sf0607374702(Gbrowse)
Chromosome: chr06 Position: 7374702 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1393 | 98.71% | 1.29% |
| All Indica | 799 | 100.00% | 0.00% |
| All Japonica | 473 | 96.41% | 3.59% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 318 | 95.91% | 4.09% |
| Tropical Japonica | 88 | 96.59% | 3.41% |
| Japonica Intermediate | 67 | 98.51% | 1.49% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0607374702 | G->A | INTERGENIC | None |