Detailed information of SNP:



SNP ID: sf0607449754(Gbrowse)

Chromosome: chr06

Position: 7449754
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1385 95.45% 4.55%
All Indica767 91.79% 8.21%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I357 93.84% 6.16%
Indica II204 94.61% 5.39%
Indica Intermediate206 85.44% 14.56%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate40 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0607449754 C->T INTERGENIC None