Detailed information of SNP:



SNP ID: sf0607477610(Gbrowse)

Chromosome: chr06

Position: 7477610
Major allele: G

Minor allele: T

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1419 96.62% 3.38%
All Indica799 99.62% 0.38%
All Japonica497 91.75% 8.25%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 98.59% 1.41%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 98.21% 1.79%
Tropical Japonica94 65.96% 34.04%
Japonica Intermediate68 95.59% 4.41%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 90.48% 9.52%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0607477610 G->T INTERGENIC None