Detailed information of SNP:
|
SNP ID:
sf0607514524(Gbrowse)
Chromosome: chr06 Position: 7514524 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 58.30% | 41.70% |
| All Indica | 796 | 98.74% | 1.26% |
| All Japonica | 497 | 1.01% | 98.99% |
| Aus | 67 | 17.91% | 82.09% |
| Indica I | 372 | 98.92% | 1.08% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 335 | 0.90% | 99.10% |
| Tropical Japonica | 94 | 1.06% | 98.94% |
| Japonica Intermediate | 68 | 1.47% | 98.53% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 41 | 53.66% | 46.34% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0607514524 | A->G | INTERGENIC | None |