Detailed information of SNP:
|
SNP ID:
sf0607561911(Gbrowse)
Chromosome: chr06 Position: 7561911 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1272 | 96.31% | 3.69% |
| All Indica | 654 | 92.97% | 7.03% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 289 | 95.50% | 4.50% |
| Indica II | 210 | 96.19% | 3.81% |
| Indica Intermediate | 155 | 83.87% | 16.13% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0607561911 | A->G | INTERGENIC | None |