Detailed information of SNP:



SNP ID: sf0607658814(Gbrowse)

Chromosome: chr06

Position: 7658814
Major allele: A

Minor allele: T

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of T(minor allele)
All1418 81.81% 18.19%
All Indica798 67.92% 32.08%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I375 59.20% 40.80%
Indica II213 94.37% 5.63%
Indica Intermediate210 56.67% 43.33%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0607658814 A->T INTERGENIC None