Detailed information of SNP:
SNP ID:
sf0607823903(Gbrowse)
Chromosome: chr06 Position: 7823903 |
Major allele:
A
Minor allele: T Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1416 | 98.09% | 1.91% |
All Indica | 798 | 99.50% | 0.50% |
All Japonica | 495 | 95.35% | 4.65% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 374 | 99.73% | 0.27% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 98.58% | 1.42% |
Temperate Japonica | 333 | 93.39% | 6.61% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 98.53% | 1.47% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0607823903 | A->T | INTERGENIC | None |