Detailed information of SNP:



SNP ID: sf0608093895(Gbrowse)

Chromosome: chr06

Position: 8093895
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 78.08% 21.92%
All Indica799 99.50% 0.50%
All Japonica497 42.25% 57.75%
Aus67 94.03% 5.97%
Indica I375 100.00% 0.00%
Indica II213 98.12% 1.88%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 58.51% 41.49%
Tropical Japonica94 3.19% 96.81%
Japonica Intermediate68 16.18% 83.82%
Group VI/Aromatic14 71.43% 28.57%
Intermediate42 71.43% 28.57%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0608093895 C->T INTERGENIC None