Detailed information of SNP:



SNP ID: sf0608276817(Gbrowse)

Chromosome: chr06

Position: 8276817
Major allele: C

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1419 61.24% 38.76%
All Indica799 74.47% 25.53%
All Japonica497 47.48% 52.52%
Aus67 5.97% 94.03%
Indica I375 60.80% 39.20%
Indica II213 95.31% 4.69%
Indica Intermediate211 77.73% 22.27%
Temperate Japonica335 25.37% 74.63%
Tropical Japonica94 97.87% 2.13%
Japonica Intermediate68 86.76% 13.24%
Group VI/Aromatic14 28.57% 71.43%
Intermediate42 71.43% 28.57%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0608276817 A->C INTERGENIC None