Detailed information of SNP:
|
SNP ID:
sf0608351272(Gbrowse)
Chromosome: chr06 Position: 8351272 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1331 | 92.86% | 7.14% |
| All Indica | 714 | 86.97% | 13.03% |
| All Japonica | 496 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 314 | 79.62% | 20.38% |
| Indica II | 209 | 97.61% | 2.39% |
| Indica Intermediate | 191 | 87.43% | 12.57% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 97.50% | 2.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0608351272 | C->G | INTERGENIC | None |