Detailed information of SNP:
|
SNP ID:
sf0608549862(Gbrowse)
Chromosome: chr06 Position: 8549862 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1406 | 90.11% | 9.89% |
| All Indica | 798 | 93.86% | 6.14% |
| All Japonica | 486 | 82.10% | 17.90% |
| Aus | 66 | 98.48% | 1.52% |
| Indica I | 374 | 92.25% | 7.75% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 211 | 93.36% | 6.64% |
| Temperate Japonica | 324 | 73.46% | 26.54% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0608549862 | A->G | INTERGENIC | None |