Detailed information of SNP:
|
SNP ID:
sf0608638666(Gbrowse)
Chromosome: chr06 Position: 8638666 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1411 | 57.34% | 42.66% |
| All Indica | 791 | 98.23% | 1.77% |
| All Japonica | 497 | 0.60% | 99.40% |
| Aus | 67 | 10.45% | 89.55% |
| Indica I | 371 | 99.19% | 0.81% |
| Indica II | 210 | 96.67% | 3.33% |
| Indica Intermediate | 210 | 98.10% | 1.90% |
| Temperate Japonica | 335 | 0.60% | 99.40% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 1.47% | 98.53% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 42 | 52.38% | 47.62% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0608638666 | A->G | INTERGENIC | None |