Detailed information of SNP:
|
SNP ID:
sf0608905633(Gbrowse)
Chromosome: chr06 Position: 8905633 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1375 | 96.07% | 3.93% |
| All Indica | 757 | 93.13% | 6.87% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 350 | 91.71% | 8.29% |
| Indica II | 207 | 94.69% | 5.31% |
| Indica Intermediate | 200 | 94.00% | 6.00% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 95.00% | 5.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0608905633 | G->T | INTERGENIC | None |