Detailed information of SNP:
SNP ID:
sf0609115058(Gbrowse)
Chromosome: chr06 Position: 9115058 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1417 | 83.06% | 16.94% |
All Indica | 797 | 74.03% | 25.97% |
All Japonica | 497 | 94.57% | 5.43% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 61.87% | 38.13% |
Indica II | 213 | 95.31% | 4.69% |
Indica Intermediate | 209 | 74.16% | 25.84% |
Temperate Japonica | 335 | 92.24% | 7.76% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 98.53% | 1.47% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0609115058 | A->G | INTERGENIC | None |