Detailed information of SNP:



SNP ID: sf0609214666(Gbrowse)

Chromosome: chr06

Position: 9214666
Major allele: A

Minor allele: T

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of T(minor allele)
All1396 92.84% 7.16%
All Indica799 100.00% 0.00%
All Japonica475 79.16% 20.84%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica314 69.43% 30.57%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate67 95.52% 4.48%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 97.56% 2.44%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0609214666 A->T INTERGENIC None