Detailed information of SNP:
SNP ID:
sf0609214666(Gbrowse)
Chromosome: chr06 Position: 9214666 |
Major allele:
A
Minor allele: T Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1396 | 92.84% | 7.16% |
All Indica | 799 | 100.00% | 0.00% |
All Japonica | 475 | 79.16% | 20.84% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 314 | 69.43% | 30.57% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 67 | 95.52% | 4.48% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0609214666 | A->T | INTERGENIC | None |