Detailed information of SNP:



SNP ID: sf0609331560(Gbrowse)

Chromosome: chr06

Position: 9331560
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 94.43% 5.57%
All Indica799 100.00% 0.00%
All Japonica497 96.58% 3.42%
Aus67 19.40% 80.60%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 95.82% 4.18%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 80.95% 19.05%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0609331560 G->A INTERGENIC None