Detailed information of SNP:
|
SNP ID:
sf0609745843(Gbrowse)
Chromosome: chr06 Position: 9745843 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1385 | 96.82% | 3.18% |
| All Indica | 784 | 97.58% | 2.42% |
| All Japonica | 484 | 96.90% | 3.10% |
| Aus | 65 | 90.77% | 9.23% |
| Indica I | 363 | 96.69% | 3.31% |
| Indica II | 212 | 99.06% | 0.94% |
| Indica Intermediate | 209 | 97.61% | 2.39% |
| Temperate Japonica | 326 | 96.63% | 3.37% |
| Tropical Japonica | 91 | 97.80% | 2.20% |
| Japonica Intermediate | 67 | 97.01% | 2.99% |
| Group VI/Aromatic | 11 | 72.73% | 27.27% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0609745843 | G->A | INTERGENIC | None |