Detailed information of SNP:



SNP ID: sf0609925306(Gbrowse)

Chromosome: chr06

Position: 9925306
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 97.88% 2.12%
All Indica797 99.87% 0.13%
All Japonica497 94.16% 5.84%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate209 99.52% 0.48%
Temperate Japonica335 92.24% 7.76%
Tropical Japonica94 97.87% 2.13%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0609925306 G->A INTERGENIC None