Detailed information of SNP:
|
SNP ID:
sf0610021115(Gbrowse)
Chromosome: chr06 Position: 10021115 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 62.23% | 37.77% |
| All Indica | 799 | 93.62% | 6.38% |
| All Japonica | 497 | 22.13% | 77.87% |
| Aus | 67 | 0.00% | 100.00% |
| Indica I | 375 | 94.67% | 5.33% |
| Indica II | 213 | 90.14% | 9.86% |
| Indica Intermediate | 211 | 95.26% | 4.74% |
| Temperate Japonica | 335 | 17.61% | 82.39% |
| Tropical Japonica | 94 | 38.30% | 61.70% |
| Japonica Intermediate | 68 | 22.06% | 77.94% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 42 | 59.52% | 40.48% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610021115 | A->G | INTERGENIC | None |