Detailed information of SNP:
|
SNP ID:
sf0610022724(Gbrowse)
Chromosome: chr06 Position: 10022724 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 63.14% | 36.86% |
| All Indica | 799 | 93.74% | 6.26% |
| All Japonica | 497 | 21.93% | 78.07% |
| Aus | 67 | 11.94% | 88.06% |
| Indica I | 375 | 94.93% | 5.07% |
| Indica II | 213 | 90.14% | 9.86% |
| Indica Intermediate | 211 | 95.26% | 4.74% |
| Temperate Japonica | 335 | 17.31% | 82.69% |
| Tropical Japonica | 94 | 39.36% | 60.64% |
| Japonica Intermediate | 68 | 20.59% | 79.41% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 42 | 71.43% | 28.57% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610022724 | A->G | INTERGENIC | None |