Detailed information of SNP:



SNP ID: sf0610027913(Gbrowse)

Chromosome: chr06

Position: 10027913
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1417 94.07% 5.93%
All Indica797 89.71% 10.29%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I374 93.85% 6.15%
Indica II213 98.12% 1.88%
Indica Intermediate210 73.81% 26.19%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0610027913 C->T INTERGENIC None