Detailed information of SNP:
|
SNP ID:
sf0610076666(Gbrowse)
Chromosome: chr06 Position: 10076666 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 61.12% | 38.88% |
| All Indica | 797 | 61.61% | 38.39% |
| All Japonica | 497 | 55.94% | 44.06% |
| Aus | 67 | 88.06% | 11.94% |
| Indica I | 374 | 71.66% | 28.34% |
| Indica II | 213 | 65.26% | 34.74% |
| Indica Intermediate | 210 | 40.00% | 60.00% |
| Temperate Japonica | 335 | 50.45% | 49.55% |
| Tropical Japonica | 94 | 61.70% | 38.30% |
| Japonica Intermediate | 68 | 75.00% | 25.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 57.14% | 42.86% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610076666 | A->G | INTERGENIC | None |