Detailed information of SNP:
|
SNP ID:
sf0610104697(Gbrowse)
Chromosome: chr06 Position: 10104697 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1399 | 80.70% | 19.30% |
| All Indica | 781 | 69.53% | 30.47% |
| All Japonica | 496 | 96.37% | 3.63% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 372 | 85.75% | 14.25% |
| Indica II | 202 | 26.73% | 73.27% |
| Indica Intermediate | 207 | 82.13% | 17.87% |
| Temperate Japonica | 335 | 98.21% | 1.79% |
| Tropical Japonica | 93 | 90.32% | 9.68% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 65.85% | 34.15% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610104697 | G->A | INTERGENIC | None |