Detailed information of SNP:
|
SNP ID:
sf0610104748(Gbrowse)
Chromosome: chr06 Position: 10104748 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1391 | 78.58% | 21.42% |
| All Indica | 774 | 65.50% | 34.50% |
| All Japonica | 495 | 96.57% | 3.43% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 369 | 85.91% | 14.09% |
| Indica II | 199 | 26.13% | 73.87% |
| Indica Intermediate | 206 | 66.99% | 33.01% |
| Temperate Japonica | 335 | 98.21% | 1.79% |
| Tropical Japonica | 94 | 89.36% | 10.64% |
| Japonica Intermediate | 66 | 98.48% | 1.52% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 65.85% | 34.15% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610104748 | G->A | INTERGENIC | None |