Detailed information of SNP:
|
SNP ID:
sf0610105911(Gbrowse)
Chromosome: chr06 Position: 10105911 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 77.31% | 22.69% |
| All Indica | 799 | 64.46% | 35.54% |
| All Japonica | 497 | 95.77% | 4.23% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 82.67% | 17.33% |
| Indica II | 213 | 18.31% | 81.69% |
| Indica Intermediate | 211 | 78.67% | 21.33% |
| Temperate Japonica | 335 | 98.21% | 1.79% |
| Tropical Japonica | 94 | 87.23% | 12.77% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 59.52% | 40.48% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610105911 | G->A | INTERGENIC | None |