Detailed information of SNP:
|
SNP ID:
sf0610113524(Gbrowse)
Chromosome: chr06 Position: 10113524 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 67.37% | 32.63% |
| All Indica | 796 | 52.01% | 47.99% |
| All Japonica | 497 | 88.13% | 11.87% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 64.53% | 35.47% |
| Indica II | 212 | 7.08% | 92.92% |
| Indica Intermediate | 209 | 75.12% | 24.88% |
| Temperate Japonica | 335 | 96.42% | 3.58% |
| Tropical Japonica | 94 | 64.89% | 35.11% |
| Japonica Intermediate | 68 | 79.41% | 20.59% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 50.00% | 50.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610113524 | G->A | INTERGENIC | None |