Detailed information of SNP:
|
SNP ID:
sf0610127101(Gbrowse)
Chromosome: chr06 Position: 10127101 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 93.79% | 6.21% |
| All Indica | 799 | 95.62% | 4.38% |
| All Japonica | 494 | 89.47% | 10.53% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 97.87% | 2.13% |
| Indica II | 213 | 90.14% | 9.86% |
| Indica Intermediate | 211 | 97.16% | 2.84% |
| Temperate Japonica | 332 | 84.94% | 15.06% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610127101 | G->A | INTERGENIC | None |