Detailed information of SNP:
SNP ID:
sf0610142070(Gbrowse)
Chromosome: chr06 Position: 10142070 |
Major allele:
T
Minor allele: G Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of T(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1419 | 96.34% | 3.66% |
All Indica | 799 | 94.24% | 5.76% |
All Japonica | 497 | 98.99% | 1.01% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 97.07% | 2.93% |
Indica II | 213 | 90.61% | 9.39% |
Indica Intermediate | 211 | 92.89% | 7.11% |
Temperate Japonica | 335 | 99.10% | 0.90% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 97.06% | 2.94% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0610142070 | T->G | INTERGENIC | None |