Detailed information of SNP:
|
SNP ID:
sf0610270988(Gbrowse)
Chromosome: chr06 Position: 10270988 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 64.67% | 35.33% |
| All Indica | 798 | 41.60% | 58.40% |
| All Japonica | 497 | 96.18% | 3.82% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 29.95% | 70.05% |
| Indica II | 213 | 38.03% | 61.97% |
| Indica Intermediate | 211 | 65.88% | 34.12% |
| Temperate Japonica | 335 | 98.51% | 1.49% |
| Tropical Japonica | 94 | 87.23% | 12.77% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 61.90% | 38.10% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610270988 | G->A | INTERGENIC | None |