Detailed information of SNP:
|
SNP ID:
sf0610271613(Gbrowse)
Chromosome: chr06 Position: 10271613 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 69.87% | 30.13% |
| All Indica | 797 | 72.90% | 27.10% |
| All Japonica | 497 | 59.15% | 40.85% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 79.14% | 20.86% |
| Indica II | 213 | 72.30% | 27.70% |
| Indica Intermediate | 210 | 62.38% | 37.62% |
| Temperate Japonica | 335 | 50.45% | 49.55% |
| Tropical Japonica | 94 | 74.47% | 25.53% |
| Japonica Intermediate | 68 | 80.88% | 19.12% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 80.95% | 19.05% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610271613 | G->A | INTERGENIC | None |