Detailed information of SNP:
|
SNP ID:
sf0610368843(Gbrowse)
Chromosome: chr06 Position: 10368843 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 65.98% | 34.02% |
| All Indica | 798 | 41.35% | 58.65% |
| All Japonica | 496 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 28.80% | 71.20% |
| Indica II | 212 | 40.09% | 59.91% |
| Indica Intermediate | 211 | 64.93% | 35.07% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 69.05% | 30.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610368843 | G->A | INTERGENIC | None |