Detailed information of SNP:
|
SNP ID:
sf0610418282(Gbrowse)
Chromosome: chr06 Position: 10418282 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 58.86% | 41.14% |
| All Indica | 799 | 89.11% | 10.89% |
| All Japonica | 497 | 19.11% | 80.89% |
| Aus | 65 | 6.15% | 93.85% |
| Indica I | 375 | 90.93% | 9.07% |
| Indica II | 213 | 93.90% | 6.10% |
| Indica Intermediate | 211 | 81.04% | 18.96% |
| Temperate Japonica | 335 | 17.61% | 82.39% |
| Tropical Japonica | 94 | 24.47% | 75.53% |
| Japonica Intermediate | 68 | 19.12% | 80.88% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 52.38% | 47.62% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0610418282 | A->G | INTERGENIC | None |