Detailed information of SNP:



SNP ID: sf0610434428(Gbrowse)

Chromosome: chr06

Position: 10434428
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1416 61.02% 38.98%
All Indica797 33.25% 66.75%
All Japonica497 99.40% 0.60%
Aus67 98.51% 1.49%
Indica I373 25.20% 74.80%
Indica II213 19.25% 80.75%
Indica Intermediate211 61.61% 38.39%
Temperate Japonica335 99.40% 0.60%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 60.98% 39.02%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0610434428 G->A INTERGENIC None